Professional Experience:
Oct 2007 - Jun 2008
Perl Software and Web developer (Bioinformatician)|Genseq, Cyberjaya, Malaysia.Nov 2006 - Sep 2007
Perl Software developer (Bioinformatician)|Biobase Database India Private Limited.Oct 2005 - Sep 2006
Research Student (Bioinformatician)|Conway Institute, UCD, Dublin, Ireland.Education:
PhD| Chemistry and Biomolecular Sciences| N/A | 2008 - At Present |Macquarie University, Sydney, Australia.
Master of Science | Computational Biology | 6.9/10 (CGPA) | 2002 - 2005 |NCBS-TIFR, Bangalore,India.
Bachelor of Science | Biotechnology | 73% | 1999 - 2002 | B.N College, Patna University, Patna, India.
Skills:
Programming Language:
C, C++, Perl, Python, PHP, JavaScript, Shell script, SQL
Databases:
MySQL, Oracle
Markup Language:
HTML, XHTML, XML, CSS
Operating System:
Window, Linux, Unix
Bioinformatics Tools:
BLAST, Clustalw, IMPALA, HMMER, Phylip, Rasmol,Other Bioinformatics Web tools and Databases
Mathematical and statistical tools:
MatLab, R-package, SciLab
Publication:
Kumar Gaurav, Nitin Gupta and R. Sowdhamini: FASSM: Enhanced Function Association in whole genome analysis using Sequence and Structural Motifs.
In Silico Biol. 2005 Oct 22; 5(4)
Participation in workshop:
Biomedical Research from Bench to Field: 1st Meeting of Indian and Max Planck Society Scientists: March 6 - 9, 2005.
Molecules, Machines and Networks: National Centre for Biological Sciences (NCBS-TIFR), Bangalore: January 5-9th 2004.
Cellular traffic: 28th Mahabaleshwar Seminar on Modern Biology: Tata Institute of Fundamental Research (TIFR), Mumbai: 23rd Feb 2003.
Molecules, Machines and Networks: National Centre for Biological Sciences (NCBS-TIFR), Bangalore: January 5-9th 2004.
Biomedical Research from Bench to Field: 1st Meeting of Indian and Max Planck Society Scientists: March 6 - 9, 2005.
Presentation & Posters:
1. Poster presentation at "InCOB-2009","Statistical Significance of Protein Interaction and Metabolic Data for SCL Prediction", September 9-11, 2009, Biopolis,Singapore.
2. Oral presentation at "SYMBIO-2009","Understanding the subcellular localisation (SCL) of eukaryotic proteins ", September 7-8, 2009, Biopolis,Singapore.
3. Poster presentation at "GIW-2008","Integration of Protein Interaction and Metabolic Data for Subcellular Localization Prediction", December 1-3, 2008, Gold Coast, Queensland, Australia.
4. Poster presentation at "Annual Research Talks","FASSM, specific signature motifs in protein families", January 18-20, 2008, NCBS-TIFR, Bangalore, India.
5. Poster presentation at "International Workshop on Systems Biology 2006","EATDB: A researcher-managed web based Application", 17-19 July 2006, Hamilton Institute, Ireland.
6. Poster presentation at " Indo-French Bioinformatics Meeting (IFBM-2006)","EATDB: Enzyme Analysis Tool and Database, 12-14 June 2006, NCBS-TIFR, India.
7. Poster presentation at "An International Symposium on human origin and genetics", 17-19 Feb. 2005,NCBS-TIFR, India.
8. Oral Presentation of my Master works at "The Student Symposium, APBC2005", 15-16 Jan 2005, Singapore.
9. Poster presentation at "The Third Asia Pacific Bioinformatics Conference", 17-21 Jan, 2005, Singapore
Master of Science | Computational Biology | 6.9/10 (CGPA) | 2002 - 2005 |NCBS-TIFR, Bangalore,India.
Bachelor of Science | Biotechnology | 73% | 1999 - 2002 | B.N College, Patna University, Patna, India.
Skills:
Programming Language:
C, C++, Perl, Python, PHP, JavaScript, Shell script, SQLDatabases:
MySQL, OracleMarkup Language:
HTML, XHTML, XML, CSSOperating System:
Window, Linux, UnixBioinformatics Tools:
BLAST, Clustalw, IMPALA, HMMER, Phylip, Rasmol,Other Bioinformatics Web tools and DatabasesMathematical and statistical tools:
MatLab, R-package, SciLabPublication:
Kumar Gaurav, Nitin Gupta and R. Sowdhamini: FASSM: Enhanced Function Association in whole genome analysis using Sequence and Structural Motifs. In Silico Biol. 2005 Oct 22; 5(4)Participation in workshop:
Biomedical Research from Bench to Field: 1st Meeting of Indian and Max Planck Society Scientists: March 6 - 9, 2005.Molecules, Machines and Networks: National Centre for Biological Sciences (NCBS-TIFR), Bangalore: January 5-9th 2004.
Cellular traffic: 28th Mahabaleshwar Seminar on Modern Biology: Tata Institute of Fundamental Research (TIFR), Mumbai: 23rd Feb 2003.
Molecules, Machines and Networks: National Centre for Biological Sciences (NCBS-TIFR), Bangalore: January 5-9th 2004.
Biomedical Research from Bench to Field: 1st Meeting of Indian and Max Planck Society Scientists: March 6 - 9, 2005.
Presentation & Posters:
1. Poster presentation at "InCOB-2009","Statistical Significance of Protein Interaction and Metabolic Data for SCL Prediction", September 9-11, 2009, Biopolis,Singapore.2. Oral presentation at "SYMBIO-2009","Understanding the subcellular localisation (SCL) of eukaryotic proteins ", September 7-8, 2009, Biopolis,Singapore.
3. Poster presentation at "GIW-2008","Integration of Protein Interaction and Metabolic Data for Subcellular Localization Prediction", December 1-3, 2008, Gold Coast, Queensland, Australia.
4. Poster presentation at "Annual Research Talks","FASSM, specific signature motifs in protein families", January 18-20, 2008, NCBS-TIFR, Bangalore, India.
5. Poster presentation at "International Workshop on Systems Biology 2006","EATDB: A researcher-managed web based Application", 17-19 July 2006, Hamilton Institute, Ireland.
6. Poster presentation at " Indo-French Bioinformatics Meeting (IFBM-2006)","EATDB: Enzyme Analysis Tool and Database, 12-14 June 2006, NCBS-TIFR, India.
7. Poster presentation at "An International Symposium on human origin and genetics", 17-19 Feb. 2005,NCBS-TIFR, India.
8. Oral Presentation of my Master works at "The Student Symposium, APBC2005", 15-16 Jan 2005, Singapore.
9. Poster presentation at "The Third Asia Pacific Bioinformatics Conference", 17-21 Jan, 2005, Singapore